Primary biliary cholangitis presenting with Fanconi syndrome: an important phenotype

  1. Chaoxui Er 1,
  2. Jessica Dyson 2,
  3. David Jones 2 and
  4. John Sayer 1
  1. 1 Renal Medicine, Freeman Hospital, Newcastle-upon-Tyne, UK
  2. 2 Hepatology, Freeman Hospital, Newcastle-upon-Tyne, UK
  1. Correspondence to Dr Chaoxui Er; cer@nhs.net

Publication history

Accepted:29 Jul 2022
First published:16 Aug 2022
Online issue publication:16 Aug 2022

Case reports

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Abstract

A woman in her 50s was referred to nephrology clinic due to progressive chronic kidney disease. She exhibited features of proximal renal tubulopathy, namely Fanconi syndrome, including normoglycaemic glycosuria, normal anion gap metabolic acidosis, and intermittent hypouricaemia and hypophosphataemia. Kidney biopsy showed tubulointerstitial inflammation and focal chronic damage. In addition, antimitochondrial antibodies were present and she had abnormal liver blood tests. A unifying diagnosis of primary biliary cholangitis with an associated renal tubulopathy and interstitial nephritis was made. She was commenced on sodium bicarbonate, ursodeoxycholic acid and oral prednisolone, leading to an improvement in liver biochemistry. Kidney function was stabilised, but a sustained improvement was not seen. This case acts as a reminder of the rare association of tubulointerstitial nephritis and Fanconi syndrome with primary biliary cholangitis, which may be an under-recognised phenotype.

Background

Primary biliary cholangitis (PBC) is a chronic, progressive autoimmune disease that eventually leads to liver failure.1 It is characterised by non-suppurative cholangitis and destruction of interlobular bile ducts.2 It is rare with an estimated incidence of 3.9–15 cases per million population per year, affecting predominantly middle-aged women.1 Its hallmark features include presence of antimitochondrial antibodies (AMA) in serum, found in 90%–95% of patients, and cholestatic liver blood tests with raised levels of alkaline phosphatase (ALP) and gamma-glutamyl transferase (GGT).1 2 Raised bilirubin level and evidence of liver synthetic dysfunction are markers of poor prognosis.3 Liver biopsy is not required for routine diagnosis due to the highly disease-specific nature of AMA but is still used where there is diagnostic uncertainty.1 National4 and European5 guidelines emphasise three key diagnostic features. These are sustained elevation (>6 months) above the upper limit of normal for serum ALP activity; characteristic changes on liver biopsy and typical pattern of serum and secretory autoantibodies (AMA or reactivity with primary-biliary-cholangitis-specific antinuclear antibodies). The presence of all three criteria (cholestatic liver biochemistry, AMA or other primary-biliary-cholangitis-specific autoantibody at a titre of >1/40, and diagnostic or supportive liver histology) indicates definite PBC and two out of three criteria is referred to as ‘probable PBC’. Serum gamma-glutamyl transferase is not part of the diagnostic criteria. The UK guidelines state that in clinical practice, the vast majority of patients are appropriately and confidently diagnosed without a liver biopsy, and in clinical practice the term ‘probable PBC’ should not be used with patients and a liver biopsy is no longer recommended to diagnose PBC when the other criteria are fulfilled. Typical symptoms are fatigue and cholestatic pruritus that can have a significant impact on quality of life for some patients.6

Immunosuppression has not been shown to have survival benefit in patients with PBC.6 Ursodeoxycholic acid (UDCA), a hydrophilic bile acid, is the recommended first-line therapy with evidence of improving liver biochemistry and delaying time to death or liver transplantation.6 With early diagnosis and effective treatment, the prognosis of PBC has significantly improved.7 Of note, the nomenclature has changed from ‘primary biliary cirrhosis’ to ‘PBC’ during the last decade to reflect the fact that many patients are not cirrhotic.7

Approximately 70% of patients with PBC have extrahepatic manifestations, mostly autoimmune phenomena, such as Sjogren’s syndrome, thyroid dysfunction and systemic sclerosis.8 Kidney involvement typically presents as distal renal tubular acidosis (dRTA), which is usually clinically silent.9 10 We present a patient with PBC who had features of tubulointerstitial nephritis and Fanconi syndrome. Recognition of this disease association is important as it is easily missed and may respond to steroid therapy.

Case presentation

A woman in her 50s was referred to nephrology clinic due to a progressive decline in kidney function. She had previously documented chronic kidney disease and type 2 diabetes mellitus (for 13 years) with proteinuria. In addition, she previously had a transaminitis and had been found to have AMA. These two criteria (cholestatic liver biochemistry and presence of AMA) indicated a likely diagnosis of PBC. Her liver biochemistry and kidney function were being regularly monitored in primary care.

When the patient was reviewed in nephrology clinic, she reported no major symptoms other than a few episodes of urinary tract infection in the preceding year. Her diabetes had been well-controlled, only requiring treatment with metformin for the previous 4 months. Her haemoglobin A1c (HbA1c)level had never been greater than 55 mmol/mol. She had no other significant medical history.

Investigations

Urine dipstick showed pH of 6, blood+, glucose 3+, protein 3+ (table 1). The severity of glycosuria was inconsistent with her good glycaemic control. She was not taking a sodium-glucose cotransporter 2 (SGLT2) inhibitor, which would have been an obvious cause of glycosuria. When her proteinuria was quantified, we found a disparity between urine albumin/creatinine ratio (ACR) and protein/creatinine ratio (PCR): 18.8 mg/mmol and 124 mg/mmol, respectively, suggesting a non-glomerular protein leak. Indeed, the urinary albumin to total urinary protein ratio was 0.15, where values <0.4 are highly suggestive of primary tubulointerstitial disorders of the kidney. Serum protein electrophoresis and serum-free light chains levels were normal. A spot urine sample was sent for further analysis, which revealed generalised aminoaciduria. Furthermore, she had intermittent hypouricaemia and hypophosphataemia, and normal anion gap metabolic acidosis. All these features are in keeping with a proximal renal tubulopathy known as Fanconi syndrome. However, she had an ‘incomplete’ Fanconi syndrome phenotype as the associated serum electrolyte deficiencies were milder and intermittent in nature. A screen for autoantibodies was negative including anti-SS-A, anti-SS-B and anti-Scl-70.

Table 1

Relevant laboratory results from patient.

Biochemistry Reference
At presentation 3 months later 9 months later 12 months later
Sodium 137 139 137 140 (133–146 mmol/L)
Potassium 4.1 4.1 3.4 3.8 (3.5–5.3 mmol/L)
Chloride 107 111 109 115 (95–108 mmol/L)
Bicarbonate 16 15 15 14 (22–29 mmol/L)
Urea 8.5 7.9 8.1 8.1 (2.5–7.8 mmol/L)
Creatinine 234 258 250 235 (45–84 µmol/L)
eGFR (CKD-EPI) 21 18 19 19 mL/min/1.73 m2
Bilirubin 5 4 6 6 (0–21 µmol/L)
Alkaline phosphatase 136 205 159 188 (30–130 unit/L)
Alanine transaminase 30 67 24 25 (0–40 unit/L)
Parathyroid hormone 1.8 1.9 Unavailable 9.0 (1.1–6.4 pmol/L)
Phosphate 0.84 0.88 0.76 0.80 (0.8–1.5 mmol/L)
Adjusted calcium 2.45 2.38 2.28 2.29 (2.2–2.6 mmol/L)
Urate 137 125 Unavailable 112 (140–360 µmol/L)
Albumin 43 42 42 44 (35–50 g/L)
HbA1c 38 39 Unavailable 43 (<42 mmol/L)
Total vitamin D 106 Unavailable Unavailable 85 (>50 nmol/L)
Haematology at presentation Reference
 Haemoglobin 108 (115–165 g/L)
 Platelet count 378×109 (150–450 x 109 /L)
 White cell count 7.13×109 (4–11 x 109 /L)
Immunology at presentation Reference
 Immunoglobulin A 2.96 (0.64–2.97 g/L)
 Immunoglobulin G 11.3 (5.8–15.4 g/L)
 Immunoglobulin M 2.85 (0.71–2.3 g/L)
 Anti-mitochondrial antibody >1/640 (0–1/40)
Urine analysis at presentation
 uACR 18.8 mg/mmol
 uPCR 124 mg/mmol
 uACR/uPCR 0.15
 Generalised aminoaciduria +ve
 Urinary pH 6.0
 Urine dipstick Glucose 3+, protein 3+, blood +, ketone trace
  • Elevated values are highlighted in orange; reduced values are highlighted in blue.

  • eGFR, estimated glomerular filtration rate; uACR, Urine albumin/creatinine ratio; uPCR, Urine protein/creatinine ratio.

Her estimated glomerular filtration rate (eGFR) was 21 mL/min/1.73 m2, demonstrating a significant decline from the historical values, prompting a kidney biopsy. This showed normal glomeruli, with normal mesangial cellularity and matrix appearances and normal basement membranes but with features typical of a tubulointerstitial nephritis with chronic tubulointerstitial damage (figure 1). The glomeruli appeared unremarkable and there were no features of diabetic nephropathy. The interstitium showed mild fibrosis. Electron microscopy did not show any other specific features. The chronic kidney disease was likely to be secondary to chronic tubulointerstitial nephritis. There was no history of infection, recent antibiotic use or significant drug to suggest an alternative cause for the tubulointerstitial nephritis. From the liver perspective, her ALP levels remained elevated with a persistently elevated serum immunoglobulin M level and circulating AMA with titre of greater than 1/640 (table 1). A liver fibroscan suggested moderate fibrosis. A diagnosis of PBC, complicated by tubulointerstitial nephritis and Fanconi syndrome, was made.

Figure 1

Renal histology a renal biopsy section from the patient (A) at low power (periodic acid–Schiff stain ×100) shows normal glomeruli and focal chronic damage and (B) at high power (periodic acid–Schiff stain ×400) shows renal tubules and interstitium infiltrated by lymphocytes (B, black arrow) in keeping with interstitial nephritis.

Differential diagnosis

Diabetes mellitus is the leading cause of chronic kidney disease. When a patient with diabetes presents with chronic kidney disease and proteinuria, diabetic nephropathy is often presumed to be the diagnosis. Our patient had a similar presentation but her severe glycosuria, despite good glycaemic control (and normal HbA1c levels) and the absence of treatment with an SGLT2 inhibitor (such as dapagliflozin) prompted further investigations, which confirmed a proximal renal tubulopathy accounting for the glycosuria and tubulointerstitial nephritis leading to progressive chronic kidney disease. There were no other underlying causes for the tubulointerstitial nephritis including drugs (such as proton pump inhibitors and non-steroidal anti-inflammatory drugs), or recent infections requiring antibiotics. There were no features of diabetic nephropathy on the renal biopsy. The elevated liver enzymes levels and presence of AMA were in keeping with a diagnosis of PBC with extrahepatic complications. Sjogren’s syndrome, which may be seen in association with PBC and may cause Fanconi syndrome, was excluded with negative immunology and a lack of supportive clinical features.

Treatment

Given the unifying diagnosis of PBC with associated tubulointerstitial nephritis and Fanconi syndrome, we commenced treatments targeted to each disease process. UDCA 900 mg (13–15 mg/kg) daily was initiated to treat the cholestasis. To correct the metabolic acidosis, sodium bicarbonate 500 mg three times a day was given. Oral prednisolone 30 mg daily was started to treat the tubulointerstitial nephritis and continued for 6 weeks. It was then tapered down to 5 mg daily over 6 weeks and weaned off over another 6 weeks.

Outcome and follow-up

The corticosteroid therapy led to an initial improvement in of eGFR to 28 mL/min/1.73 m2, however, this was not sustained (figure 2). Further corticosteroid therapy was considered but its potential benefit would be at the expense of worsening glycaemic control and weight gain. Moreover, COVID-19 became a global concern at this time. In view of these factors, further immunosuppressive therapy was not given. UDCA was well tolerated and titrated further (according to weight) to 1250 mg daily and liver enzymes levels improved.

Figure 2

Clinical and biochemical timeline over a 3-year period. The change in estimated glomerular filtration rate (eGFR) in the index case is shown. The patient was referred to kidney clinic due to progressive chronic kidney disease. Prednisolone 30 mg daily was commenced and maintained for 6 weeks before weaning.

Discussion

PBC may be associated with several extrahepatic disorders. dRTA is the typical kidney disorder, seen in 33%–60% of patients,11 and is likely to have an autoimmune aetiology although the exact pathophysiological mechanisms remain unclear. Tubulointerstitial nephritis, an inflammation of the kidney interstitium, may also complicate PBC and can result in acute kidney injury or chronic kidney disease and may also present with renal tubular acidosis.12–15 Other causes of tubulointerstitial nephritis include drugs, infections and autoimmune disorders such as Sjogren’s syndrome.12

Tubulointerstitial nephritis associated with PBC was first described by Macdougall et al.16 Several more cases have been reported since then and almost all patients displayed features of renal tubulopathy, including the proximal tubulopathy known as Fanconi syndrome, dRTA or both.9–11 16–22 The finding of both distal renal tubular phenotypes (such as dRTA) and proximal renal tubular phenotypes (such as Fanconi syndrome) is intriguing and points to a shared mechanism, perhaps relating to interstitial inflammation. Most of these reported patients did not have symptoms of PBC.9–11 16–22 Corticosteroid therapy was given to treat tubulointerstitial nephritis and the majority of cases showed good response with improvement in kidney function.9–11 16–22

The mechanism of kidney involvement in PBC remains unclear. Lino et al suggested that AMA might have a role in the pathogenesis.9 Takahashi et al determined that IgM-CD138 dual-positive plasma cells infiltrated the portal tract of patients with PBC and the renal interstitium of patients with a rare histologic variant of tubulointerstitial nephritis. This type of tubulointerstitial nephritis is characterised by infiltration of IgM-positive plasma cells and a high prevalence of dRTA, Fanconi syndrome and AMA, which are features observed in PBC but less than half of the patients met the criteria for the diagnosis. This finding, however, suggests that there was a common pathway to autoimmune inflammation in the liver and kidneys of these patients.22 Cholangiocyte senescence is now recognised as an important pathological process in PBC and results in epithelial cell dysfunction.23 We speculate a shared mechanism whereby renal epithelial cell injury in PBC may also lead to senescence which drives kidney interstitial fibrosis and leads to tubular phenotypes that include dRTA and Fanconi syndrome.

Here, we report a case of tubulointerstitial nephritis and Fanconi syndrome in a patient with PBC and chronic kidney disease. The referral to nephrology clinic was delayed, in part because the cause of the progressive chronic kidney disease was attributed to diabetes mellitus and complications of primary biliary cirrhosis were not considered. Rare inherited conditions, such as cystinosis, Wilson’s disease and Lowe syndrome, may all present with Fanconi syndrome. Acquired causes of Fanconi syndrome are more common and include drugs (eg, antiretroviral, cisplatin, azathioprine and gentamicin), monoclonal gammopathies and heavy metal poisoning.24 Our patient had no history or clinical signs suggestive of any of these diagnoses, so we correlated her Fanconi syndrome with the autoimmune condition PBC, in view of the presence of AMA, raised serum IgM level and mildly raised ALP level. Renal biopsy was performed due to her declining kidney function which showed normal glomeruli but with evidence of tubulointerstitial nephritis. During a follow-up, her ALP level remained persistently elevated, and therefore, this case provided ongoing biochemical and immunological features to support the diagnosis of PBC without a liver biopsy. Cases of tubulointerstitial nephritis with tubular dysfunction in patients with PBC have been identified in retrospective studies,10 22 suggesting that this kidney phenotype is underdiagnosed. Although it rarely causes clinical symptoms, a few cases of osteomalacia complicating Fanconi syndrome have been reported.9 21 Of note, our patient had recurrent urinary tract infections, which may have been a consequence of heavy glycosuria. Our case highlights the importance of recognising normoglycaemic glycosuria, even in patients with known diabetes mellitus and checking paired urine ACR and PCR, looking for an excess of non-glomerular proteins, as these subtle findings could be clues to making an important diagnosis of a renal tubulopathy.25 NICE has recently approved the use of the SGLT2 inhibitors in selected patients with chronic kidney disease. Indeed, as the number of patients with diabetes and without diabetes with chronic kidney disease and other indications treated with SGLT2 inhibitors increases26 the detection of significant glycosuria will increase and may mask diagnoses such as Fanconi syndrome. Awareness of the significance of glycosuria and its differential diagnosis is therefore of great importance for every physician.

In conclusion, this case has demonstrated the association of tubulointerstitial nephritis and Fanconi syndrome with PBC, which is an important phenotype that can be missed.

Patient’s perspective

My initial thoughts and reactions to being told I had PBC, which had then affected my kidneys was a mixture of emotions. These included relief - that I didn’t have kidney cancer that was causing the problem. I was both surprised and shocked as I had never showed any signs or had any symptoms of PBC. I was also happy to get a more precise diagnosis and an explanation of my test results. But then that made me worried and concerned that I now had two organs that were not functioning correctly. I was frightened and wondered why I had this rare diagnosis.

On reflection, I think that other patients with PBC need to be aware of the association with renal Fanconi syndrome, the need for regular kidney function testing (bloods) and urinalysis. My advice for other doctors would be: don’t presume that kidney function deterioration and abnormal urinalysis results are due to diabetes, please investigate further and see the bigger picture.

Learning points

  • Distal renal tubular acidosis is the typical renal tubular disorder associated with primary biliary cholangitis but tubulointerstitial nephritis, leading to chronic kidney disease, is increasingly recognised and can be associated with Fanconi syndrome. Fanconi syndrome should be recognised as a possible complication of primary biliary cholangitis.

  • Undertaking routine urine dipstick identifies glycosuria and prompts screening for a more generalised renal tubular dysfunction. The finding may be significant even in patients with a diagnosis of diabetes mellitus.

  • A low urinary albumin to total urinary protein ratio is often associated with tubulointerstitial kidney diseases.

Ethics statements

Patient consent for publication

Acknowledgments

We thank Dr Katrina Wood, consultant histopathologist in the Newcastle upon Tyne Hospitals NHS Foundation Trust, for providing the image of renal biopsy section in our case report,

Footnotes

  • Contributors CE and JS conceived the study, collated data and wrote the first draft. JD and DJ revised and edited the draft. All authors approved the final manuscript.

  • Funding The authors have not declared a specific grant for this research from any funding agency in the public, commercial or not-for-profit sectors.

  • Case reports provide a valuable learning resource for the scientific community and can indicate areas of interest for future research. They should not be used in isolation to guide treatment choices or public health policy.

  • Competing interests JS has received support from Northern Counties Kidney Research Fund and Kidney Research UK for the present manuscript, and speaker honoraria from Sanofi and Takeda. JD has received speaker honararia from Dr Falk Pharma and Intercept, and support for attending meeting from Intercept.

  • Provenance and peer review Not commissioned; externally peer reviewed.

References

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